CDS

Accession Number TCMCG051C30640
gbkey CDS
Protein Id XP_024465185.1
Location join(12717124..12717548,12717778..12717895,12718032..12718378,12718477..12718608,12718892..12719004,12719074..12719405)
Gene LOC7462679
GeneID 7462679
Organism Populus trichocarpa

Protein

Length 488aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA17973
db_source XM_024609417.1
Definition zinc finger protein VAR3, chloroplastic isoform X4 [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category S
Description Zinc finger domain
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE -
KEGG_ko -
EC -
KEGG_Pathway -
GOs GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009451        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009532        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009570        [VIEW IN EMBL-EBI]
GO:0009657        [VIEW IN EMBL-EBI]
GO:0009658        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0016556        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044434        [VIEW IN EMBL-EBI]
GO:0044435        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:1900865        [VIEW IN EMBL-EBI]
GO:1900871        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAATAAGCTCTTTCAATTTCGCCATGAATATCTTTCTTTTTCCATTAAAAGCTGTTATAAAAACCCTAAGTTTCTTCTACCCATTTCACATTTGCACAGCTTCTCCAAAACCCAGGATCTAGACTTCATTTTCGAGGAGGTAGAAGTCCTCGATTCTTCAAAACCCACAAACCAAAAAAACCAACTTCCATCAAAAACTAACGAACCGTCCGATGACAGCCACCCCAGTGAACGAATGGAATCGACGGTTCAGATTTCCCATCCCTGGCCTGAATGGGTGGATTTGATGGAATTGCTGTTAAAGAGAGGGTACTTTGAAGCTGGTGGAAACCCAGTTGGAAACAAGGAACTGGGTTCCAAGGACGCGAGTTGTATTAGAACCGCGTGCCTTAATTTTGCACGGGATCGGTTTGGACTTATAAGGTACTTCTCGAGGAAAGATATTGGGGTTATTGCAGGATGCGGCTGCCCTAGCATAGATAGAAAAGTTGTGAACTCTGGGAAACGTTTAAGAGCACATGTGGGCATCAACGAAGGACATGTTTGCAGCTCCTGCAACTTAAGGGGAGACTGTGAAAGGGCATATGTCAAAGCACGAGAAGATGAAGGTGGGCGAACTGTGGATGTCATGCGTATTCTACTGACATATGGGCTCGATTATGTTTCCGGTACAGTGGAGAATAAGCCATGTCAAAAGAACAAAATGGTTAAACAATCAGTGAGAAGGCTGCTGAAGGAGTTGGTGGGCCTTAGCAATGACGAACTTGTCTCTGACCTCCCTAATGGCAAACCCTTGAAAAGGGGTCTCCCTTTACCAAATAATTCGACTACACAAGATAAAGGCCCAATAAATGTTCCAATGAAGCCTGGCGATTGGCTTTGCCCTGAATGCAACTTCCTCAATTTTGCCAGAAATGTTAGATGTCTGCGGTGTGATGGATTGCACCATGAAAGGCTAAAGCATCTATGCGAGGATCAGGATCATCTTCCATTAAAGAAAGGAGACTGGATTTGTGCAATGTGCAACTACATCAATTTCAGAAGAAACATGGTATGCTTGAAATGTGATCATAGAAGGCCAAAGGCATCAAATTGTTTAAAGTCATCTACTGAGCTTGAACATGGCAAGGGAGGAGTGCATGGAACACATCACAACAGAGGTGCAGACGTGTGGAGATTTGTGGAAGAAGAAAGAGAAGATAATCATTCAATTTCATCGAATGAGGGTGTGAGATTTGTAGATTTCCCTATTGCGGGAGGAAAGAGCAGTTTGTCTCAAAATGCCCAAAAAAGAGAGAGATGGAAGCTAGAAATGTTGGAGAGGAGCAAAGGTGGTGTGCATGTGGAAGAAGATGAAAAGGAATTTGAATATGCCAACACTCAAAGAAGATTCAAGTACCTTGAATCTACTGATGATGAAGATATGGCTGAATGGTTTGGACATGGAGGGAAAAAGGAAACATGA
Protein:  
MNKLFQFRHEYLSFSIKSCYKNPKFLLPISHLHSFSKTQDLDFIFEEVEVLDSSKPTNQKNQLPSKTNEPSDDSHPSERMESTVQISHPWPEWVDLMELLLKRGYFEAGGNPVGNKELGSKDASCIRTACLNFARDRFGLIRYFSRKDIGVIAGCGCPSIDRKVVNSGKRLRAHVGINEGHVCSSCNLRGDCERAYVKAREDEGGRTVDVMRILLTYGLDYVSGTVENKPCQKNKMVKQSVRRLLKELVGLSNDELVSDLPNGKPLKRGLPLPNNSTTQDKGPINVPMKPGDWLCPECNFLNFARNVRCLRCDGLHHERLKHLCEDQDHLPLKKGDWICAMCNYINFRRNMVCLKCDHRRPKASNCLKSSTELEHGKGGVHGTHHNRGADVWRFVEEEREDNHSISSNEGVRFVDFPIAGGKSSLSQNAQKRERWKLEMLERSKGGVHVEEDEKEFEYANTQRRFKYLESTDDEDMAEWFGHGGKKET